tobac
v1.5.1

Basic Information

  • Installation
  • Data Input
  • Analysis
  • Plotting
  • Handling Large Datasets
  • Example notebooks
  • Refereed Publications

Feature Detection

  • Feature Detection Basics
  • Threshold Feature Detection Parameters
  • Feature Detection Parameter Examples
    • How multiple thresholds changes the features detected
    • How n_min_threshold changes what features are detected
    • Different threshold_position options
    • tobac Feature Detection Filtering
  • Feature Detection Output

Segmentation

  • Segmentation
  • Watershedding Segmentation Parameters
  • Segmentation Output
  • Features without segmented areas
  • Track on one dataset, segment on another

Tracking

  • Linking
  • Tracking Output

Merge/Split

  • Merge and Split

API Reference

  • tobac package
tobac
  • Docs »
  • Feature Detection Parameter Examples
  • Edit on GitHub

Feature Detection Parameter ExamplesΒΆ

  • How multiple thresholds changes the features detected
    • Imports
    • Generate Feature Data
    • Single Threshold
    • Multiple Thresholds
  • How n_min_threshold changes what features are detected
    • Imports
    • Generate Feature Data
    • No n_min_threshold
    • Increasing n_min_threshold
    • Different n_min_threshold for different threshold values
    • Strict Thresholding (strict_thresholding)
  • Different threshold_position options
    • Imports
    • Generate Feature Data
    • position_threshold='center'
    • position_threshold='extreme'
    • position_threshold='weighted_diff'
    • position_threshold='weighted_abs'
    • All four methods together
  • tobac Feature Detection Filtering
    • Imports
    • Generate Feature Data
    • Gaussian Filtering (sigma_threshold parameter)
    • Erosion (n_erosion_threshold parameter)
Next Previous

© Copyright Revision 57385cd2.

Built with Sphinx using a theme provided by Read the Docs.